Insertion junction: CLIP2.016292_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016292
Chromosome:chromosome 7
Location:5456296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350900 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAGAAGGGGCTGACATGTTGACTCAGCGCGCGGCACTACAGCCGTTG
Internal bar code:CTAATGCCGCTGGGTAGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1822
LEAP-Seq percent confirming:83.908
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCTCTTTGCCTTCAGTA
Suggested primer 2:AAAGGCCTTCCCTCATCACG