Insertion junction: CLIP2.016294_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016294
Chromosome:chromosome 1
Location:4850545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033700 (1 of 1) PF01933 - Uncharacterised protein family UPF0052 (UPF0052) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGGACTGGGTGGCTGACGGTGGGCGGTGCAGGCGTGTTGGGGGCCT
Internal bar code:TCAAGCACTTCCAAGCAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTGTGTGTCCTACTGCC
Suggested primer 2:AGGTTAACATTGGGAGGGCG