Insertion junction: CLIP2.016300_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016300
Chromosome:chromosome 15
Location:733780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801691 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED intron
lncRNA_TCONS_00216392 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGATGCAACAGTCGATTCGCCCCGAGCTTCGCTGGTGTCCCGAACCCT
Internal bar code:CGGCGGGGATGCCCGTCCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCATCGTATCGGTCTGG
Suggested primer 2:CCTCCCCTTCCTTCCCCATA