Insertion junction: CLIP2.016304_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016304
Chromosome:chromosome 17
Location:3177309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721000 ABCA5 (1 of 2) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // SUBFAMILY NOT NAMED; ABC transporter 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACTAACAGGCGCGGGCTTTCTTCCTACCTTCCCATCGTCCTAGCTTC
Internal bar code:GAACTTGATAAAGCAGTTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2004
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTCCGCCTCATCTCCAA
Suggested primer 2:GTAGGTGCACTCGGTGTTGA