Insertion junction: CLIP2.016323_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016323
Chromosome:chromosome 15
Location:5583248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre46.g760947 (1 of 7) IPR022772 - von Hippel-Lindau disease tumour suppressor, beta/alpha domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAAGTGAAGTCGTAGCCAGGTACAAAGGTACACAGGGGGGGTGGGGG
Internal bar code:TGCAGTCTGAGGATAAAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTGCTGTCTACTTCGC
Suggested primer 2:CTCCTGCTCCTCCTCTTCCT