Insertion junction: CLIP2.016324_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016324
Chromosome:chromosome 3
Location:8029993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGTGGGCAATGAGGTGTGCTTAGGGGATGGCTGTGCAGGCGTTCGC
Internal bar code:TAATTAAGTTGGCGAATAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3570
LEAP-Seq percent confirming:77.3585
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGATAGCCGCCTCGTCAATC
Suggested primer 2:CACGAGCAAGCTAAATCGGC