Insertion junction: CLIP2.016324_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016324
Chromosome:chromosome 3
Location:8029996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTACCACGGTGATGACTGCCTCTGTCAGGACCGGGGGGCTTGGGAC
Internal bar code:TAATTAAGTTGGCGAATAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2131
LEAP-Seq percent confirming:99.0654
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGCAAGCTAAATCGGC
Suggested primer 2:TGATAGCCGCCTCGTCAATC