Insertion junction: CLIP2.016333_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016333
Chromosome:chromosome 16
Location:2037795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656950 (1 of 1) PTHR13140:SF300 - PROTEIN TAG-278-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCAGCGACACCAGCCGGCTGTCCACGTCGGCCTTGGAGGTGCCAGC
Internal bar code:GCGTTAGCGGGTTGGACCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5840
LEAP-Seq percent confirming:83.6066
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGGAGGCGCTTCAAAGT
Suggested primer 2:CTCCGACTCCAGAGACTCCA