Insertion junction: CLIP2.016333_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016333
Chromosome:chromosome 16
Location:2037797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656950 (1 of 1) PTHR13140:SF300 - PROTEIN TAG-278-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGCGTGAGCAGCTGGCGTCGCAGCTGAGCGCCGCTGACGCTGAGCG
Internal bar code:GCGTTAGCGGGTTGGACCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2174
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGACTCCAGAGACTCCA
Suggested primer 2:TGAAGGAGGCGCTTCAAAGT