Insertion junction: CLIP2.016338_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016338
Chromosome:chromosome 7
Location:3712509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGCTGACTCGCGGCTGCCGCGGACTGCGGACTGGCGAGCCTGATGA
Internal bar code:TTGATCACTCTGGTATGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2213
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACGAGCGAGTCCCTTA
Suggested primer 2:TGCCAGTGCTATTGCTGCTA