Insertion junction: CLIP2.016341_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016341
Chromosome:chromosome 8
Location:4422844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385350 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACACGGGGTGATTACGCGCGGGCGATCTTGTGCAGCGCTCATTAGCA
Internal bar code:GTGGGGGGTGGCGCTGATTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3235
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACAGTTGAGGGAGTCGC
Suggested primer 2:CACATGTCGCATGCATCTGG