Insertion junction: CLIP2.016348_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016348
Chromosome:chromosome 4
Location:1731203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212150 (1 of 1) IPR013815//IPR027417 - ATP-grasp fold, subdomain 1 // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCCTGTATGGACTCGTCTCTTTGGAGTGCTGGCAGCGGCCTGTGGAA
Internal bar code:TTCAACGAACGTGCCTGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTTCAGAGGTGGGGCAT
Suggested primer 2:TCTCCTGCGAGAACACAACC