Insertion junction: CLIP2.016355_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016355
Chromosome:chromosome 17
Location:2417630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714600 HFO33 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCGCCCTTGCCCAGGCCCTTGCCGCCCTTGCCACGTCCGGACATG
Internal bar code:CTTGATGCCATTAAAGGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:85.1064
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGGTTCGTGTCCTCGAA
Suggested primer 2:GGTGTGCTGCTTTGTCAAGG