Insertion junction: CLIP2.016373_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016373
Chromosome:chromosome 6
Location:5953272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290100 SYP6 Early endosomal Qc-SNARE protein, Syx6/Tlg1/Syntaxin 6-family (Qc.III.b); (1 of 1) K08498 - syntaxin 6 (STX6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGAACCAAACCCAAAGGCCACTGGACTGCACTGCGAGGACTGCAC
Internal bar code:TGAGGTTGTCGGGTATAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTAGTTATCCCCCGCGTG
Suggested primer 2:TGTGTCGCTCACTTGACCTC