Insertion junction: CLIP2.016391_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016391
Chromosome:chromosome 3
Location:3367763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTGTCATCGGCTCCAAACACGGCCAGTCGCCGCGCGACCGCACGTAA
Internal bar code:ACGCCGACTGTAGTTCGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5865
LEAP-Seq percent confirming:98.9362
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATGCAAGGAGAGGGAA
Suggested primer 2:TGCTTTCGTTTTCGCTTGGG