Insertion junction: CLIP2.016391_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016391
Chromosome:chromosome 3
Location:3367767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGCGTCCAGGCCCGCGTCCTGCACGATCACACACACGCGACGGGAAG
Internal bar code:ACGCCGACTGTAGTTCGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1791
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTCGTTTTCGCTTGGG
Suggested primer 2:CTGCATGCAAGGAGAGGGAA