Insertion junction: CLIP2.016394_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016394
Chromosome:chromosome 8
Location:3384425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCACTTATGTGAGCCACGACCCCCACACGCACGCGCACGCAGGCCACG
Internal bar code:CCCTTGGTCCAAGTTTGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4822
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGAATCCCACATTTCCA
Suggested primer 2:GGATAGGTGGGTGGGTAGGT