Insertion junction: CLIP2.016398_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016398
Chromosome:chromosome 7
Location:1288874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322176 (1 of 1) K03002 - DNA-directed RNA polymerase I subunit RPA2 (RPA2, POLR1B) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCATGGAATCGACTCCCCCCCCTGCCCTGCCCACCCACCCACTTAC
Internal bar code:TAGGACTATGGCACGGGTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCCCTTGTTATGGCAT
Suggested primer 2:TCAAGCCAAACTAGCGAGCA