Insertion junction: CLIP2.016401_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016401
Chromosome:chromosome 16
Location:7005886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673281 (1 of 1) K00477 - phytanoyl-CoA hydroxylase (PHYH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCTCGTCAAACGCTTTGTCCTCGAAGAAGAAACCTGGCAGGCGGCG
Internal bar code:ACCTATGCCCTGTGTATCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGGTGTGTGACGGAAT
Suggested primer 2:CGCACGTAGAGAGCCTAGTG