Insertion junction: CLIP2.016423_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016423
Chromosome:chromosome 9
Location:1746817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398350 (1 of 2) K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGCTGCGGTCTGCGGCGGCCTGTGCTCCGATGCAGTTAGTACCGAAG
Internal bar code:CCCAATGTTTAAGTTAATTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3240
LEAP-Seq percent confirming:15.5844
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACCGATGACTGCACTG
Suggested primer 2:GCATTCTTGTGCACGGGTTT