Insertion junction: CLIP2.016431_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016431
Chromosome:chromosome 10
Location:2045593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432550 KCN2 Six-transmembrane domain potassium channel alpha subunit; (1 of 1) PTHR11537:SF133 - PROTEIN EXP-2, ISOFORM C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGTCGCCGTAGCCCACAGTCATCAGCGTCACAATCGCCCACCTGCG
Internal bar code:AGTGGGCGAATTGGCTGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:160
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:160

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCTCGCTCTGCATCGTC
Suggested primer 2:GGTTCCCACCACAGAGATGG