Insertion junction: CLIP2.016434_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016434
Chromosome:chromosome 10
Location:1176029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425800 ORN1 (1 of 1) 3.1.13.3 - Oligonucleotidase; Putative organellar oligoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTGTTGCCTTTTTCGCTCGCGCGCCTTTCCGCTCACACCGTTTGCCT
Internal bar code:GGCTTCTTAGTAAGACTGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5180
LEAP-Seq percent confirming:87.7049
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCCCCATTCCCGAAATG
Suggested primer 2:CTACATCCAGACGTCTCCGC