Insertion junction: CLIP2.016438_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016438
Chromosome:chromosome 9
Location:4587818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCTGACTTCGAGGCTGGGCCCGCCGTCGCTGCCATCCGGGATGCCTA
Internal bar code:GCAGGGTGAATGACGATGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3331
LEAP-Seq percent confirming:97.6471
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCGAATGTTTGCATCA
Suggested primer 2:TAATCATCGATGCACCGCGA