Insertion junction: CLIP2.016439_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016439
Chromosome:chromosome 2
Location:885997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078950 MMP17 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCGGGGTGTGGAGCGCCAGCCGGCGGCGGCAGGGACAGCGGCGGGGC
Internal bar code:TGAGCTTGAAGACCTCTCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3961
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAAGGGGACATGAGGG
Suggested primer 2:AGCTAGGGTACGTGCCACTA