Insertion junction: CLIP2.016447_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016447
Chromosome:chromosome 6
Location:4172132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278234 FAP343 (1 of 19) PF00397 - WW domain (WW); Flagellar Associated Protein 343 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACCACCGCCCTGGTATGGCCCCCTGCAGGCCAAGGCTGAGCAGGA
Internal bar code:ATCAGTTGAAGTGATCCAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2350
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGATACAGCGTGTGTCA
Suggested primer 2:CTCGCACACACCAATCTTGC