Insertion junction: CLIP2.016447_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016447
Chromosome:chromosome 6
Location:4172135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278234 FAP343 (1 of 19) PF00397 - WW domain (WW); Flagellar Associated Protein 343 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTGGTGGTGGTGGGGGAGAGGCAGAGGGAGAGCATGTTGGGCTTCC
Internal bar code:TTAATTCATTTGCGGAAGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCACACACCAATCTTGC
Suggested primer 2:GTGGGATACAGCGTGTGTCA