Insertion junction: CLIP2.016465_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016465
Chromosome:chromosome 3
Location:411127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144847 PYK4 (1 of 2) PTHR11817//PTHR11817:SF3 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCTGTGCAGGAATATGATCGACTTCGTGAGCATCCCCAACGTGCGC
Internal bar code:GGTATGTCCTATCGCGGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATACATGATCTGCGCGCTGA
Suggested primer 2:GTCTTCCTTCACCTCTGCCC