Insertion junction: CLIP2.016467_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016467
Chromosome:chromosome 17
Location:3713119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726000 PAP3 Class-II RNA nucleotidyl transferase 3, mitochondrial; (1 of 2) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGCTTGATGACAGGAGCTAGGAAACACCGTGTCAGGCACGGGCACA
Internal bar code:GCAGTACCTTCTTATGGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:477
LEAP-Seq percent confirming:24.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTATGGGACTCGGTAC
Suggested primer 2:TGCTTTGACGACGAGAAGCT