Insertion junction: CLIP2.016480_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016480
Chromosome:chromosome 16
Location:193617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694942 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATGGAGGTCGGGTTTCTCCAGCTAACGGCTCGGATTTAAATTGTCA
Internal bar code:TTGTTTAGTCTGAGCTTTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2128
LEAP-Seq percent confirming:76.6667
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCCCCATGTGCTCCCAT
Suggested primer 2:CCAGTGTCCTCTTGCTCAGG