Insertion junction: CLIP2.016496_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016496
Chromosome:chromosome 4
Location:1352920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCGCGTGTGCCCGCTGTACCTCTGGACGTCGGCACTTCACTTCATAT
Internal bar code:GGCTAAGCACGATGTCCATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGTTGTCGCCAGTACT
Suggested primer 2:ATACAAATACACGCGCACGC