Insertion junction: CLIP2.016500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016500
Chromosome:chromosome 3
Location:3183447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165050 PMA4 (1 of 3) K01535 - H+-transporting ATPase (E3.6.3.6); Plasma membrane P-type calcium ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGCACGATCGCAAGCCCCGGCGACGCACTCCCCCGGGCCGCACAAC
Internal bar code:GGTGTTTCTCTGGCGTCTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGTGACTTCCTCCCTC
Suggested primer 2:ACCACCAGAACACGCAGTAG