Insertion junction: CLIP2.016500_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016500
Chromosome:chromosome 3
Location:3183475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165050 PMA4 (1 of 3) K01535 - H+-transporting ATPase (E3.6.3.6); Plasma membrane P-type calcium ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCAGGTGCAAGCGCCACGTGAGCCTGCGCCATACACCATGTCACATG
Internal bar code:ACGAATATGGTGTCGGGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:828
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCAGAACACGCAGTAG
Suggested primer 2:CACACGTGACTTCCTCCCTC