Insertion junction: CLIP2.016510_6

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016510
Chromosome:chromosome 10
Location:6153648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462350 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGAACACCAATCGCTAACGACGATTTGGGTACGTGTTAGGCAGGCA
Internal bar code:CAGCTAGTAGTTTCTGGAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2515
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACTTGTGCACAGCCAC
Suggested primer 2:CACGACGCCGATCCATAAGA