Insertion junction: CLIP2.016516_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016516
Chromosome:chromosome 11
Location:1848033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467350 ACO2 Acyl-CoA oxidase/dehydrogenase; (1 of 1) PF01756//PF02770 - Acyl-CoA oxidase (ACOX) // Acyl-CoA dehydrogenase, middle domain (Acyl-CoA_dh_M) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCAAAACCAACCCGCTCAAACCAACCAACCAACCAACCCAAACAGG
Internal bar code:GTAATATTCAAGTCGCAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGACCCTAACCCCAGCT
Suggested primer 2:CTTCCGTGAGAACCCCTTCC