Insertion junction: CLIP2.016518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016518
Chromosome:chromosome 17
Location:2208452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712700 TNP45 putative transposase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCGGGGCTCGCCCTGCAGGATGCACATCAGCAGCATGAGCATGTTC
Internal bar code:TGAGCCTTTATGATGGCGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGAGGACTTGTTCGACC
Suggested primer 2:CATGAGGTCAGGTGCCCAAT