Insertion junction: CLIP2.016521_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016521
Chromosome:chromosome 1
Location:4642002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032100 (1 of 1) K10570 - DNA excision repair protein ERCC-8 (ERCC8, CKN1, CSA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCGGGCGTGTGGGCGGGATATGTGTGATGGGGACCGCCGGCACTAC
Internal bar code:CTTGGTATAGAAAAACCTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2484
LEAP-Seq percent confirming:67.6692
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCACAACCGTGCAACAG
Suggested primer 2:TAGTGCGGTTTGCTGTACGT