Insertion junction: CLIP2.016521_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016521
Chromosome:chromosome 1
Location:4642004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032100 (1 of 1) K10570 - DNA excision repair protein ERCC-8 (ERCC8, CKN1, CSA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGCATTGTCACCCCAGCTGCACGCTGGGCGGCATTTTTGGGGAACG
Internal bar code:GAGTCCGTGCACTCGGGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6330
LEAP-Seq percent confirming:77.686
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCGGTTTGCTGTACGT
Suggested primer 2:CTTCCACAACCGTGCAACAG