Insertion junction: CLIP2.016536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016536
Chromosome:chromosome 1
Location:5887891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCAAAGCTTTGCGAGGGGGCGCCAAACAGGGCGCTTCCATTCCCCAG
Internal bar code:AACTCTAAGTACTAAAGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:756
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTGTCCTAGCATCATC
Suggested primer 2:TTCAACCTTTCGCTTGCTGC