Insertion junction: CLIP2.016536_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016536
Chromosome:chromosome 1
Location:5887905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGCTTTGAGCGAGCTGCCTCTCATACTTGGTATCCGAATAAAATTCC
Internal bar code:AACTCTAAGTACTAAAGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2768
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACCTTTCGCTTGCTGC
Suggested primer 2:GCCCCTGTCCTAGCATCATC