Insertion junction: CLIP2.016541_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016541
Chromosome:chromosome 17
Location:3319261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802064 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATAACGGCTGTTTACTGCTCAGACTATACGTCAGCAGCCGCGACAGC
Internal bar code:TAGTCTGTAATCCTCTCTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTTCCACGGGATAGAC
Suggested primer 2:CTCGCTACCCTGCTGATGAG