Insertion junction: CLIP2.016541_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016541
Chromosome:chromosome 17
Location:3319277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802064 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAGCCGTTATGATGTGAGCCTGCACCAGCATCTCCAGCATGTCGGGA
Internal bar code:AGATATCTTCGTTAGGTGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5047
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTACCCTGCTGATGAG
Suggested primer 2:CTCGCTTCCACGGGATAGAC