Insertion junction: CLIP2.016546_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016546
Chromosome:chromosome 10
Location:2760677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438200 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACCTGTTTGCACAGGGTTGCATAAGCGAGTTAGACACGCAAGGTGAA
Internal bar code:ATGCGGTTTTGATTGGTACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3619
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCTCCCCTCTTCC
Suggested primer 2:ATGATCTGCGGCGTGATGAT