Insertion junction: CLIP2.016549_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016549
Chromosome:chromosome 7
Location:1166860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321050 (1 of 1) PTHR11772//PTHR11772:SF3 - ASPARAGINE SYNTHETASE // ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCAGCGGGCGGCCCCGCGGTCAGGCGACTTGCCGCCGTCGAAGCATA
Internal bar code:ATCTGAGAAGTGGTCCAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4323
LEAP-Seq percent confirming:44.5652
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ATATCGCCAGTCACGTCGAC
Suggested primer 2:TCATCACGTCCCAAGTTCCG