Insertion junction: CLIP2.016550_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016550
Chromosome:chromosome 8
Location:4083936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383101 FAP324 (1 of 1) PF00041//PF13418 - Fibronectin type III domain (fn3) // Galactose oxidase, central domain (Kelch_4); Flagellar Associated Protein 324 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCACGCAGGCGGGTGCCAGTACCAGGAAGGCGGGAGGGGCAAGACGCC
Internal bar code:ATGGTCATTGTAATCTGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACTTACCGTTCGCTGA
Suggested primer 2:TGCCCCTCCTTGGTTTGTTT