Insertion junction: CLIP2.016551_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016551
Chromosome:chromosome 2
Location:6922056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388949 (1 of 1) PTHR10237 - DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN CDS/5'UTR
Cre09.g388986 (1 of 1) PTHR23329//PTHR23329:SF9 - TUFTELIN-INTERACTING PROTEIN 11-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATGCACCGGCAGTAAATTTGACGGAAAGTCCCGGCGGTTCCGATCT
Internal bar code:GCTTTTGATAGCGACCGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2484
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCCTTGTGTTCGTGCT
Suggested primer 2:TAGACAGGGACAGGGACAGG