Insertion junction: CLIP2.016556_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016556
Chromosome:chromosome 2
Location:4176804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCAAGAGGCTAGGAGCGACGCTGCGGTCCTGGACGTTGTCGAGCAGC
Internal bar code:GGCTCATAAGATGAAAATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2799
LEAP-Seq percent confirming:81.3953
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTTCCCCCTGCCAAAAA
Suggested primer 2:CTGCCAACGAAGAACGCAAA