Insertion junction: CLIP2.016559_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016559
Chromosome:chromosome 9
Location:2176944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395500 HEATR2,HTR2A,HEATR2A,DNAAF5 5-Hydroxytryptamine Receptor 2A; (1 of 3) IPR016024//IPR021133 - Armadillo-type fold // HEAT, type 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACCCTCGCCGCCTTTTTCACCCACTCCTACTCCCCGACTCCCCGAC
Internal bar code:TGTATAGTCTGGTTATCTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGTGCTTGGAGCGGAA
Suggested primer 2:TCGCTGGATGAGGACTGGTA