Insertion junction: CLIP2.016560_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016560
Chromosome:chromosome 16
Location:4190527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670200 Microtubule-associated protein cysteine-rich PDZ-binding protein; (1 of 2) PTHR11805:SF1 - CYSTEINE-RICH PDZ-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGATACCGCTTACCGTTTTGCCCCTGTGAGCAACTTGTTCTCGTTGAC
Internal bar code:AGGACTAGTCTGCGTTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATAGTTCTGGGCCGGGT
Suggested primer 2:CGCTCATGCTAGCCATACCA