Insertion junction: CLIP2.016560_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016560
Chromosome:chromosome 16
Location:4190530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670200 Microtubule-associated protein cysteine-rich PDZ-binding protein; (1 of 2) PTHR11805:SF1 - CYSTEINE-RICH PDZ-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACGCCTGCAGCGGCGTACGGAGCAAAGACATGGCGTCTCGCAAGCTC
Internal bar code:AGGACTAGTCTGCGTTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2908
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCATGCTAGCCATACCA
Suggested primer 2:CAAATAGTTCTGGGCCGGGT