Insertion junction: CLIP2.016562_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016562
Chromosome:chromosome 2
Location:4141084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041505

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGTACTTCTGGGGTGCGTAATCCTTCCTACGCATGTCACAGGTGCG
Internal bar code:GTGATGGTCTTACCCGGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3847
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCAGGAACTCGAATCC
Suggested primer 2:ATACCTGCAACCCTCCTTGC